BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F03LP1|AL425562
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1671 1900 0.0
>3x_Contig1671
Length = 12265
Score = 1900 bits (957), Expect = 0.0
Identities = 996/1004 (99%), Gaps = 5/1004 (0%)
Strand = Plus / Minus
Query: 4 gatcttgctgataggctagtgccttcattccttcagtctgagac-ggaattccatattcg 62
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 8879 gatcttgctgataggctagtgccttcattccttcagtctgagaccggaattccatattcg 8820
Query: 63 agtataaatttagcatctggcaaagctattaagaatcatgccgataatggtgcctcttct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8819 agtataaatttagcatctggcaaagctattaagaatcatgccgataatggtgcctcttct 8760
Query: 123 actgctgaatttacgactttacagatggaattagaaatatttgagttacatcacaggtaa 182
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 8759 actgctgaatttacgactttacagatggaatt-gaaatatttgagttacatcacaggtaa 8701
Query: 183 tactacttactggaaattgtgtgagaaggtttacgatccactatacaggaataacaatct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8700 tactacttactggaaattgtgtgagaaggtttacgatccactatacaggaataacaatct 8641
Query: 243 agtaggacgccactaccagggactaatccctatcttcaccaatccagataccggtgtttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8640 agtaggacgccactaccagggactaatccctatcttcaccaatccagataccggtgtttt 8581
Query: 303 ccaaggatcaataattagatttggttctcgtggagactcgttttacgaatatctcttgaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8580 ccaaggatcaataattagatttggttctcgtggagactcgttttacgaatatctcttgaa 8521
Query: 363 acaaaatttacttaccggtgaagttctctacagaaagctctacgatttttcgatggatag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8520 acaaaatttacttaccggtgaagttctctacagaaagctctacgatttttcgatggatag 8461
Query: 423 tatgaagaggcatctactaggcgagagtaaaggtcaattgcatcttaaatacattgggga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8460 tatgaagaggcatctactaggcgagagtaaaggtcaattgcatcttaaatacattgggga 8401
Query: 483 gaaggattatggcttagctggaccaacatcgtccaaattcgaccatttggtatgtttcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8400 gaaggattatggcttagctggaccaacatcgtccaaattcgaccatttggtatgtttcat 8341
Query: 543 gggtgggttattagcgatgggagccacgaatggtaaaccatactctgaagctgcgaatgg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8340 gggtgggttattagcgatgggagccacgaatggtaaaccatactctgaagctgcgaatgg 8281
Query: 603 tcctgactggaatcctacgaaacaaaatgactgggaactcgctgaggatttgacaaagtc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8280 tcctgactggaatcctacgaaacaaaatgactgggaactcgctgaggatttgacaaagtc 8221
Query: 663 ttgttatgaaatgtatcaccaaatcccatcaggattgtcaccagaaatcgttgttttcaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8220 ttgttatgaaatgtatcaccaaatcccatcaggattgtcaccagaaatcgttgttttcaa 8161
Query: 723 tagtaactaccctaacgctgaacctaactggtggagatctgagtncgaagactatttcgt 782
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 8160 tagtaactaccctaacgctgaacctaactggtggagatctgagtccgaagactatttcgt 8101
Query: 783 aaagccctttgacaaacacaacatccaacgcccagaaactgtbgaatctctaatgttttt 842
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8100 aaagccctttgacaaacacaacatccaacgcccagaaactgtcgaatctctaatgttttt 8041
Query: 843 gtatcatttatcaggaaatgaacaatatagacactgggggatgggaaatctttagcaatt 902
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 8040 gtatcatttatcaggaaatgaacaatatagacact-ggggatgggaaatctttagcaatt 7982
Query: 903 tcatcaagcatactaaagtcattaaagtcgcggcggatggcgaagaaaaggtcgc-atac 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7981 tcatcaagcatactaaagtcattaaagtcgcggcggatggcgaagaaaaggtcgcaatac 7922
Query: 962 acttcgttgcatwatgttatttcattacc-acagacaaagctga 1004
|||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 7921 acttcgttgcataatgttatttcattaccaacagacaaagctga 7878
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6432
Number of Sequences: 1807
Number of extensions: 6432
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)